Browsing by author "Sadanandam, Anguraj"
Now showing items 1-12 of 12
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A Cross-Species Analysis in Pancreatic Neuroendocrine Tumors Reveals Molecular Subtypes with Distinctive Clinical, Metastatic, Developmental, and Metabolic Characteristics.
Sadanandam, A; Wullschleger, S; Lyssiotis, CA; Grötzinger, C; Barbi, S; et al. (2015-12)Unlabelled Seeking to assess the representative and instructive value of an engineered mouse model of pancreatic neuroendocrine tumors (PanNET) for its cognate human cancer, we profiled and compared mRNA and miRNA ... -
A Novel Statistical Method to Diagnose, Quantify and Correct Batch Effects in Genomic Studies.
Nyamundanda, G; Poudel, P; Patil, Y; Sadanandam, A (NATURE PORTFOLIO, 2017-09-07)Genome projects now generate large-scale data often produced at various time points by different laboratories using multiple platforms. This increases the potential for batch effects. Currently there are several batch ... -
ARAF suppresses ERBB3 expression and metastasis in a subset of lung cancers.
Mooz, J; Riegel, K; Ps, H; Sadanandam, A; Marini, F; et al. (2022-03-18)RAF kinases are highly conserved serine/threonine kinases, and among the three RAF isoforms (ARAF, BRAF, and CRAF), the pathophysiological relevance of ARAF is not well defined. Here, we show that patients with lung cancer ... -
Cannabinoids in the landscape of cancer.
Mangal, N; Erridge, S; Habib, N; Sadanandam, A; Reebye, V; et al. (SPRINGER, 2021-07-14)INTRODUCTION: Cannabinoids are a group of terpenophenolic compounds derived from the Cannabis sativa L. plant. There is a growing body of evidence from cell culture and animal studies in support of cannabinoids possessing ... -
A Case Report on Longitudinal Collection of Tumour Biopsies for Gene Expression-Based Tumour Microenvironment Analysis from Pancreatic Cancer Patients Treated with Endoscopic Ultrasound Guided Radiofrequency Ablation.
Lawrence, PV; Desai, K; Wadsworth, C; Mangal, N; Kocher, HM; et al. (MDPI, 2022-09-21)BACKGROUND: Most patients with pancreatic ductal adenocarcinoma (PDAC) are metastatic at presentation with dismal prognosis warranting improved systemic therapy options. Longitudinal sampling for the assessment of treatment ... -
Detection of postoperative plasma circulating tumour DNA and lack of CDX2 expression as markers of recurrence in patients with localised colon cancer.
Tarazona, N; Gimeno-Valiente, F; Gambardella, V; Huerta, M; Roselló, S; et al. (2020-09)Background Colon cancer (CC) is a heterogeneous disease. Novel prognostic factors beyond pathological staging are required to accurately identify patients at higher risk of relapse. Integrating these new biological factors, ... -
DNA methylation patterns identify subgroups of pancreatic neuroendocrine tumors with clinical association.
Lakis, V; Lawlor, RT; Newell, F; Patch, A-M; Mafficini, A; et al. (2021-02-03)Here we report the DNA methylation profile of 84 sporadic pancreatic neuroendocrine tumors (PanNETs) with associated clinical and genomic information. We identified three subgroups of PanNETs, termed T1, T2 and T3, with ... -
Immunological combination treatment holds the key to improving survival in pancreatic cancer.
Sodergren, MH; Mangal, N; Wasan, H; Sadanandam, A; Balachandran, VP; et al. (2020-11)Advances in surgery, peri-operative care and systemic chemotherapy have not significantly improved the prognosis of pancreatic cancer for several decades. Early clinical trials of immunotherapy have yielded disappointing ... -
Is the tumour microenvironment a critical prognostic factor in early-stage colorectal cancer?
Nyamundanda, G; Fontana, E; Sadanandam, A (2019-10) -
Prognostic and predictive impact of consensus molecular subtypes and CRCAssigner classifications in metastatic colorectal cancer: a translational analysis of the TRIBE2 study.
Borelli, B; Fontana, E; Giordano, M; Antoniotti, C; Lonardi, S; et al. (2021-03-03)Introduction The consensus molecular subtypes (CMS) demonstrated prognostic value in metastatic colorectal cancer (mCRC). Similarly, a prognostic impact was suggested for the pre-consensus CRCAssigner (CRCA) classifier in ... -
Refining colorectal cancer classification and clinical stratification through a single-cell atlas.
Khaliq, AM; Erdogan, C; Kurt, Z; Turgut, SS; Grunvald, MW; et al. (BMC, 2022-05-11)BACKGROUND: Colorectal cancer (CRC) consensus molecular subtypes (CMS) have different immunological, stromal cell, and clinicopathological characteristics. Single-cell characterization of CMS subtype tumor microenvironments ... -
Uridine-derived ribose fuels glucose-restricted pancreatic cancer.
Nwosu, ZC; Ward, MH; Sajjakulnukit, P; Poudel, P; Ragulan, C; et al. (NATURE PORTFOLIO, 2023-06-01)Pancreatic ductal adenocarcinoma (PDA) is a lethal disease notoriously resistant to therapy1,2. This is mediated in part by a complex tumour microenvironment3, low vascularity4, and metabolic aberrations5,6. Although altered ...