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dc.contributor.authorLan, C
dc.contributor.authorHeindl, A
dc.contributor.authorHuang, X
dc.contributor.authorXi, S
dc.contributor.authorBanerjee, S
dc.contributor.authorLiu, J
dc.contributor.authorYuan, Y
dc.date.accessioned2020-07-23T15:04:47Z
dc.date.issued2015-11-17
dc.identifier.citationScientific reports, 2015, 5 pp. 16317 - ?
dc.identifier.issn2045-2322
dc.identifier.urihttps://repository.icr.ac.uk/handle/internal/3858
dc.identifier.eissn2045-2322
dc.identifier.doi10.1038/srep16317
dc.description.abstractConcerted efforts in genomic studies examining RNA transcription and DNA methylation patterns have revealed profound insights in prognostic ovarian cancer subtypes. On the other hand, abundant histology slides have been generated to date, yet their uses remain very limited and largely qualitative. Our goal is to develop automated histology analysis as an alternative subtyping technology for ovarian cancer that is cost-efficient and does not rely on DNA quality. We developed an automated system for scoring primary tumour sections of 91 late-stage ovarian cancer to identify single cells. We demonstrated high accuracy of our system based on expert pathologists' scores (cancer = 97.1%, stromal = 89.1%) as well as compared to immunohistochemistry scoring (correlation = 0.87). The percentage of stromal cells in all cells is significantly associated with poor overall survival after controlling for clinical parameters including debulking status and age (multivariate analysis p = 0.0021, HR = 2.54, CI = 1.40-4.60) and progression-free survival (multivariate analysis p = 0.022, HR = 1.75, CI = 1.09-2.82). We demonstrate how automated image analysis enables objective quantification of microenvironmental composition of ovarian tumours. Our analysis reveals a strong effect of the tumour microenvironment on ovarian cancer progression and highlights the potential of therapeutic interventions that target the stromal compartment or cancer-stroma signalling in the stroma-high, late-stage ovarian cancer subset.
dc.formatElectronic
dc.format.extent16317 - ?
dc.languageeng
dc.language.isoeng
dc.publisherNATURE PORTFOLIO
dc.rights.urihttps://creativecommons.org/licenses/by/4.0
dc.subjectStromal Cells
dc.subjectHumans
dc.subjectOvarian Neoplasms
dc.subjectDisease Progression
dc.subjectNeoplasm Staging
dc.subjectPrognosis
dc.subjectDisease-Free Survival
dc.subjectImmunohistochemistry
dc.subjectSurvival Rate
dc.subjectMultivariate Analysis
dc.subjectProportional Hazards Models
dc.subjectAutomation
dc.subjectAdult
dc.subjectAged
dc.subjectAged, 80 and over
dc.subjectMiddle Aged
dc.subjectFemale
dc.subjectTumor Microenvironment
dc.titleQuantitative histology analysis of the ovarian tumour microenvironment.
dc.typeJournal Article
dcterms.dateAccepted2015-10-12
rioxxterms.versionofrecord10.1038/srep16317
rioxxterms.licenseref.urihttps://creativecommons.org/licenses/by/4.0
rioxxterms.licenseref.startdate2015-11-17
rioxxterms.typeJournal Article/Review
dc.relation.isPartOfScientific reports
pubs.notesNot known
pubs.organisational-group/ICR
pubs.organisational-group/ICR/Primary Group
pubs.organisational-group/ICR/Primary Group/ICR Divisions
pubs.organisational-group/ICR/Primary Group/ICR Divisions/Molecular Pathology
pubs.organisational-group/ICR/Primary Group/ICR Divisions/Molecular Pathology/Computational Pathology & Integrated Genomics
pubs.organisational-group/ICR/Primary Group/Royal Marsden Clinical Units
pubs.organisational-group/ICR
pubs.organisational-group/ICR/Primary Group
pubs.organisational-group/ICR/Primary Group/ICR Divisions
pubs.organisational-group/ICR/Primary Group/ICR Divisions/Molecular Pathology
pubs.organisational-group/ICR/Primary Group/ICR Divisions/Molecular Pathology/Computational Pathology & Integrated Genomics
pubs.organisational-group/ICR/Primary Group/Royal Marsden Clinical Units
pubs.publication-statusPublished
pubs.volume5
pubs.embargo.termsNot known
icr.researchteamComputational Pathology & Integrated Genomics
dc.contributor.icrauthorYuan, Yinyin


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