Show simple item record

dc.contributor.authorFrankish, A
dc.contributor.authorDiekhans, M
dc.contributor.authorFerreira, A-M
dc.contributor.authorJohnson, R
dc.contributor.authorJungreis, I
dc.contributor.authorLoveland, J
dc.contributor.authorMudge, JM
dc.contributor.authorSisu, C
dc.contributor.authorWright, J
dc.contributor.authorArmstrong, J
dc.contributor.authorBarnes, I
dc.contributor.authorBerry, A
dc.contributor.authorBignell, A
dc.contributor.authorCarbonell Sala, S
dc.contributor.authorChrast, J
dc.contributor.authorCunningham, F
dc.contributor.authorDi Domenico, T
dc.contributor.authorDonaldson, S
dc.contributor.authorFiddes, IT
dc.contributor.authorGarcía Girón, C
dc.contributor.authorGonzalez, JM
dc.contributor.authorGrego, T
dc.contributor.authorHardy, M
dc.contributor.authorHourlier, T
dc.contributor.authorHunt, T
dc.contributor.authorIzuogu, OG
dc.contributor.authorLagarde, J
dc.contributor.authorMartin, FJ
dc.contributor.authorMartínez, L
dc.contributor.authorMohanan, S
dc.contributor.authorMuir, P
dc.contributor.authorNavarro, FCP
dc.contributor.authorParker, A
dc.contributor.authorPei, B
dc.contributor.authorPozo, F
dc.contributor.authorRuffier, M
dc.contributor.authorSchmitt, BM
dc.contributor.authorStapleton, E
dc.contributor.authorSuner, M-M
dc.contributor.authorSycheva, I
dc.contributor.authorUszczynska-Ratajczak, B
dc.contributor.authorXu, J
dc.contributor.authorYates, A
dc.contributor.authorZerbino, D
dc.contributor.authorZhang, Y
dc.contributor.authorAken, B
dc.contributor.authorChoudhary, JS
dc.contributor.authorGerstein, M
dc.contributor.authorGuigó, R
dc.contributor.authorHubbard, TJP
dc.contributor.authorKellis, M
dc.contributor.authorPaten, B
dc.contributor.authorReymond, A
dc.contributor.authorTress, ML
dc.contributor.authorFlicek, P
dc.date.accessioned2020-06-11T12:18:20Z
dc.date.issued2019-01-08
dc.identifier.citationNucleic acids research, 2019, 47 (D1), pp. D766 - D773
dc.identifier.issn0305-1048
dc.identifier.urihttps://repository.icr.ac.uk/handle/internal/3723
dc.identifier.eissn1362-4962
dc.identifier.doi10.1093/nar/gky955
dc.description.abstractThe accurate identification and description of the genes in the human and mouse genomes is a fundamental requirement for high quality analysis of data informing both genome biology and clinical genomics. Over the last 15 years, the GENCODE consortium has been producing reference quality gene annotations to provide this foundational resource. The GENCODE consortium includes both experimental and computational biology groups who work together to improve and extend the GENCODE gene annotation. Specifically, we generate primary data, create bioinformatics tools and provide analysis to support the work of expert manual gene annotators and automated gene annotation pipelines. In addition, manual and computational annotation workflows use any and all publicly available data and analysis, along with the research literature to identify and characterise gene loci to the highest standard. GENCODE gene annotations are accessible via the Ensembl and UCSC Genome Browsers, the Ensembl FTP site, Ensembl Biomart, Ensembl Perl and REST APIs as well as https://www.gencodegenes.org.
dc.formatPrint
dc.format.extentD766 - D773
dc.languageeng
dc.language.isoeng
dc.publisherOXFORD UNIV PRESS
dc.rights.urihttps://creativecommons.org/licenses/by/4.0
dc.subjectAnimals
dc.subjectHumans
dc.subjectMice
dc.subjectComputational Biology
dc.subjectGenomics
dc.subjectPseudogenes
dc.subjectGenome, Human
dc.subjectInternet
dc.subjectSoftware
dc.subjectDatabases, Genetic
dc.subjectMolecular Sequence Annotation
dc.titleGENCODE reference annotation for the human and mouse genomes.
dc.typeJournal Article
dcterms.dateAccepted2018-10-08
rioxxterms.versionofrecord10.1093/nar/gky955
rioxxterms.licenseref.urihttps://creativecommons.org/licenses/by/4.0
rioxxterms.licenseref.startdate2019-01
rioxxterms.typeJournal Article/Review
dc.relation.isPartOfNucleic acids research
pubs.issueD1
pubs.notesNot known
pubs.organisational-group/ICR
pubs.organisational-group/ICR/Primary Group
pubs.organisational-group/ICR/Primary Group/ICR Divisions
pubs.organisational-group/ICR/Primary Group/ICR Divisions/Cancer Biology
pubs.organisational-group/ICR/Primary Group/ICR Divisions/Cancer Biology/Functional Proteomics Group
pubs.organisational-group/ICR
pubs.organisational-group/ICR/Primary Group
pubs.organisational-group/ICR/Primary Group/ICR Divisions
pubs.organisational-group/ICR/Primary Group/ICR Divisions/Cancer Biology
pubs.organisational-group/ICR/Primary Group/ICR Divisions/Cancer Biology/Functional Proteomics Group
pubs.publication-statusPublished
pubs.volume47
pubs.embargo.termsNot known
icr.researchteamFunctional Proteomics Group
dc.contributor.icrauthorWright, James
dc.contributor.icrauthorChoudhary, Jyoti


Files in this item

Thumbnail

This item appears in the following collection(s)

Show simple item record

https://creativecommons.org/licenses/by/4.0
Except where otherwise noted, this item's license is described as https://creativecommons.org/licenses/by/4.0